SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18280	-0.0008717600	0.23640	0.0008717600	25690	59.86670	88.44238	11.55622	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55740	0.0025186260	0.59520	0.0025186260	7362	17.15604	42.88508	57.11090	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60810	-0.0040326180	0.61180	0.0040326180	1942	4.52554	15.92903	84.06454	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21240	0.0038981960	0.22770	0.0038981960	2154	5.01957	17.27128	82.72250	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58920	-0.0002982210	0.63230	0.0002982210	36638	85.37938	98.51120	1.48833	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	0.0017335180	0.40350	0.0017335180	13816	32.19612	64.41073	35.58650	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25890	0.0008606600	0.32560	0.0008606600	25902	60.36074	88.73549	11.26314	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54720	0.0040734470	0.57680	0.0040734470	1872	4.36242	15.47623	84.51727	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56570	0.0033530770	0.56780	0.0033530770	3509	8.17720	25.08688	74.90777	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37030	-0.0001949230	0.40800	0.0001949230	38797	90.41061	99.35834	0.64135	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12150	-0.0001269650	0.20270	0.0001269650	40219	93.72437	99.72429	0.27550	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24760	0.0009703110	0.25200	0.0009703110	23998	55.92375	85.95852	14.03993	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54530	-0.0013291900	0.50700	0.0013291900	18720	43.62416	76.32473	23.67315	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24440	0.0015531040	0.25970	0.0015531040	15826	36.88013	69.67676	30.32076	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43530	0.0042962610	0.47910	0.0042962610	1541	3.59107	13.26644	86.72670	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik