SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18300	-0.0009556970	0.23790	0.0009556970	24201	56.39681	86.29020	13.70827	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55580	0.0025650010	0.59330	0.0025650010	7070	16.47558	41.68870	58.30720	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60910	-0.0037660240	0.62370	0.0037660240	2461	5.73499	19.11089	80.88309	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21100	0.0040791940	0.22730	0.0040791940	1857	4.32746	15.33566	84.65782	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59020	-0.0000118680	0.63580	0.0000118680	42662	99.41741	99.99758	0.00240	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47320	0.0018786140	0.40280	0.0018786140	12323	28.71691	60.12310	39.87389	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25920	0.0010622740	0.32250	0.0010622740	22505	52.44454	83.55753	16.44078	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54750	0.0038861920	0.57560	0.0038861920	2200	5.12677	17.51737	82.47642	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56360	0.0034086480	0.56920	0.0034086480	3378	7.87192	24.35434	75.64021	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	-0.0000871690	0.40400	0.0000871690	40973	95.48145	99.86405	0.13581	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12130	-0.0000024660	0.20290	0.0000024660	42869	99.89979	99.99991	0.00008	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24650	0.0008744540	0.25290	0.0008744540	25566	59.57774	88.28476	11.71384	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54540	-0.0013374290	0.50880	0.0013374290	18605	43.35617	76.09820	23.89966	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24350	0.0014953590	0.26050	0.0014953590	16525	38.50904	71.39352	28.60409	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43600	0.0041288090	0.48180	0.0041288090	1752	4.08277	14.64721	85.34619	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik