SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43750	0.0001568480	0.43340	0.0001568480	35809	91.71917	99.52833	0.47138	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05800	0.0013670160	0.08200	0.0013670160	15677	40.15419	72.65800	27.33944	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75130	-0.0015027430	0.74500	0.0015027430	14152	36.24814	68.56399	31.43320	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.79890	0.0015523350	0.82160	0.0015523350	13564	34.74207	66.88386	33.11323	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20370	-0.0016650370	0.23300	0.0016650370	12333	31.58906	63.18020	36.81668	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53510	0.0020485160	0.49320	0.0020485160	8955	22.93684	51.50062	48.49555	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20150	-0.0025301080	0.23930	0.0025301080	5720	14.65089	37.73410	62.26116	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06440	-0.0019178900	0.06400	0.0019178900	10021	25.66723	55.45180	44.54461	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.53140	-0.0012848000	0.52600	0.0012848000	16695	42.76164	75.18203	24.81557	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02640	0.0010702330	0.03460	0.0010702330	19683	50.41494	81.76144	18.23656	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68960	-0.0015124360	0.66050	0.0015124360	14041	35.96383	68.25083	31.74634	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82680	0.0029226050	0.84390	0.0029226050	3920	10.04047	28.58012	71.41441	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58710	-0.0005715510	0.58240	0.0005715510	27835	71.29502	94.15861	5.84032	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.24290	0.0019046310	0.20940	0.0019046310	10132	25.95154	55.84871	44.14772	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25840	-0.0013588640	0.23060	0.0013588640	15770	40.39240	72.89518	27.10227	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik