SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43770	-0.0000746070	0.44290	0.0000746070	37688	96.15022	99.89628	0.10359	rs29026456
BTA-07775-no-rs	1	38649369	785	0.06180	0.0018219680	0.08410	0.0018219680	11026	28.12970	58.67287	41.32377	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75700	-0.0013976440	0.74430	0.0013976440	15578	39.74284	72.09935	27.89808	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80390	0.0013013810	0.82210	0.0013013810	16822	42.91655	75.18845	24.80915	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20340	-0.0016920000	0.22950	0.0016920000	12282	31.33403	62.74028	37.25660	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53270	0.0017186040	0.49300	0.0017186040	12021	30.66816	61.92020	38.07663	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20440	-0.0022923620	0.24330	0.0022923620	7362	18.78205	44.87436	55.12142	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06320	-0.0022333130	0.06440	0.0022333130	7745	19.75917	46.47203	53.52386	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.53870	-0.0013554430	0.53820	0.0013554430	16096	41.06437	73.41325	26.58426	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02410	0.0006830960	0.03310	0.0006830960	26141	66.69133	91.98307	8.01567	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68350	-0.0017843230	0.66290	0.0017843230	11394	29.06855	59.89590	40.10081	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82860	0.0032340000	0.84200	0.0032340000	2969	7.57456	23.01578	76.97826	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58810	-0.0010129290	0.58330	0.0010129290	20822	53.12141	83.69247	16.30566	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.23830	0.0016788800	0.20900	0.0016788800	12417	31.67844	63.15945	36.83746	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25940	-0.0006963480	0.23870	0.0006963480	25896	66.06628	91.67200	8.32672	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik