SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18280	0.0009340520	0.23640	0.0009340520	25532	59.49851	88.50170	11.49692	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55740	0.0003353710	0.59520	0.0003353710	36145	84.23052	98.33380	1.66571	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60810	0.0007734670	0.61180	0.0007734670	28187	65.68559	91.85464	8.14421	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21240	0.0008986310	0.22770	0.0008986310	26102	60.82681	89.27595	10.72271	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58920	-0.0027438230	0.63230	0.0027438230	7151	16.66434	42.68074	57.31520	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	-0.0014855990	0.40350	0.0014855990	17805	41.49189	74.76211	25.23569	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25890	0.0004646870	0.32560	0.0004646870	33701	78.53514	96.88914	3.11018	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54720	-0.0009603780	0.57680	0.0009603780	25156	58.62230	87.97421	12.02436	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56570	0.0005194150	0.56780	0.0005194150	32688	76.17450	96.15011	3.84912	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37030	-0.0002584590	0.40800	0.0002584590	37636	87.70507	98.98929	1.01033	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12150	0.0027974850	0.20270	0.0027974850	6868	16.00485	41.51897	58.47688	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24760	0.0003973950	0.25200	0.0003973950	34941	81.42478	97.68108	2.31833	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54530	0.0008551840	0.50700	0.0008551840	26782	62.41145	90.15967	9.83906	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24440	0.0000371160	0.25970	0.0000371160	42143	98.20796	99.97882	0.02112	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43530	0.0006247380	0.47910	0.0006247380	30767	71.69789	94.52439	5.47468	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik