SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18300	0.0008891640	0.23790	0.0008891640	26182	61.01324	89.35209	10.64659	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55580	0.0002726750	0.59330	0.0002726750	37322	86.97334	98.87567	1.12392	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60910	0.0008932230	0.62370	0.0008932230	26109	60.84312	89.25499	10.74368	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21100	0.0007416150	0.22730	0.0007416150	28738	66.96961	92.45671	7.54218	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59020	-0.0028529200	0.63580	0.0028529200	6468	15.07271	39.71707	60.27867	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47320	-0.0016696170	0.40280	0.0016696170	15591	36.33249	69.51434	30.48316	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25920	0.0007917020	0.32250	0.0007917020	27802	64.78840	91.38540	8.61342	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54750	-0.0010110640	0.57560	0.0010110640	24273	56.56460	86.64671	13.35179	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56360	0.0004994370	0.56920	0.0004994370	32972	76.83632	96.36987	3.62938	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	0.0000030390	0.40400	0.0000030390	42849	99.85319	99.99985	0.00015	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12130	0.0027740760	0.20290	0.0027740760	6890	16.05611	41.48911	58.50675	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24650	0.0002441720	0.25290	0.0002441720	37882	88.27834	99.09164	0.90799	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54540	0.0008870850	0.50880	0.0008870850	26220	61.10179	89.40246	10.59621	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24350	-0.0002553830	0.26050	0.0002553830	37649	87.73537	99.00471	0.99491	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43600	0.0004699340	0.48180	0.0004699340	33553	78.19025	96.79115	3.20815	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik