SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43630	0.0013407150	0.44410	0.0013407150	15704	40.14007	73.21134	26.78613	rs29026456
BTA-07775-no-rs	1	38649369	785	0.06080	-0.0007922750	0.08180	0.0007922750	23669	60.49894	89.01369	10.98482	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75590	-0.0012437690	0.75120	0.0012437690	16969	43.37346	76.28817	23.70949	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80830	-0.0009863150	0.83080	0.0009863150	20586	52.61866	83.86238	16.13577	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20810	-0.0006921190	0.23430	0.0006921190	25328	64.73941	91.33029	8.66841	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53210	0.0024266260	0.49040	0.0024266260	6290	16.07750	41.00393	58.99150	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20490	-0.0021406370	0.24370	0.0021406370	8132	20.78573	48.90812	51.08785	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06360	0.0009317620	0.06060	0.0009317620	21443	54.80919	85.40846	14.58978	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.54020	0.0003583120	0.53720	0.0003583120	31609	80.79391	97.50794	2.49139	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02540	-0.0016204890	0.03250	0.0016204890	12589	32.17800	64.54892	35.44803	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68040	0.0015515780	0.65330	0.0015515780	13313	34.02858	66.71059	33.28649	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82700	0.0017456540	0.84520	0.0017456540	11346	29.00084	60.60970	39.38702	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58590	-0.0009178720	0.58130	0.0009178720	21638	55.30762	85.74809	14.25018	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.23850	0.0021708310	0.20710	0.0021708310	7911	20.22084	48.01132	51.98459	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25710	0.0010628010	0.23620	0.0010628010	19483	49.79935	81.73357	18.26443	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik