SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18280	0.0006486230	0.23640	0.0006486230	30507	71.09200	94.16341	5.83563	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55740	-0.0006165430	0.59520	0.0006165430	31079	72.42496	94.69981	5.29927	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60810	-0.0018060720	0.61180	0.0018060720	14380	33.51044	66.07104	33.92629	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21240	-0.0002185450	0.22770	0.0002185450	38590	89.92823	99.30051	0.69917	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58920	0.0003763590	0.63230	0.0003763590	35554	82.85328	97.96897	2.03047	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	-0.0009117690	0.40350	0.0009117690	26084	60.78486	89.05740	10.94124	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25890	-0.0009314380	0.32560	0.0009314380	25739	59.98089	88.58656	11.41206	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54720	-0.0011433610	0.57680	0.0011433610	22507	52.44920	83.62977	16.36853	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56570	-0.0023076570	0.56780	0.0023076570	10025	23.36176	52.86868	47.12790	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37030	0.0021847020	0.40800	0.0021847020	10997	25.62686	56.10112	43.89564	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12150	0.0017757820	0.20270	0.0017757820	14699	34.25382	66.91747	33.07990	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24760	-0.0040215100	0.25200	0.0040215100	2581	6.01463	19.88030	80.11374	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54530	0.0024375810	0.50700	0.0024375810	9082	21.16424	49.55253	50.44386	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24440	-0.0027230970	0.25970	0.0027230970	7328	17.07681	42.85630	57.13967	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43530	-0.0037076440	0.47910	0.0037076440	3341	7.78570	24.22788	75.76663	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik