SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43750	-0.0011099880	0.43340	0.0011099880	17455	44.70826	76.42906	23.56859	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05800	0.0019784440	0.08200	0.0019784440	7597	19.45853	45.29060	54.70522	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75130	0.0021943770	0.74500	0.0021943770	6015	15.40649	38.33464	61.66073	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.79890	0.0011658070	0.82160	0.0011658070	16632	42.60028	74.45175	25.54579	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20370	0.0012560370	0.23300	0.0012560370	15320	39.23979	71.09703	28.90032	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53510	0.0009582120	0.49320	0.0009582120	19829	50.78889	81.60310	18.39488	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20150	-0.0027246310	0.23930	0.0027246310	3355	8.59331	24.66906	75.32519	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06440	-0.0001352940	0.06400	0.0001352940	35988	92.17765	99.56831	0.43140	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.53140	0.0004123380	0.52600	0.0004123380	30010	76.86594	96.13749	3.86164	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02640	-0.0008582120	0.03460	0.0008582120	21577	55.26612	84.95322	15.04497	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68960	-0.0017776790	0.66050	0.0017776790	9345	23.93576	52.21750	47.77874	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82680	0.0033827920	0.84390	0.0033827920	1450	3.71395	12.52151	87.47135	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58710	-0.0021651810	0.58240	0.0021651810	6210	15.90595	39.23181	60.76362	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.24290	0.0004335950	0.20940	0.0004335950	29547	75.68004	95.72332	4.27576	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25840	-0.0030384420	0.23060	0.0030384420	2317	5.93463	18.37512	81.61847	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik