SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18300	0.0008301880	0.23790	0.0008301880	27317	63.65818	90.69999	9.29877	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55580	-0.0010213530	0.59330	0.0010213530	24211	56.42012	86.43380	13.56468	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60910	-0.0019224230	0.62370	0.0019224230	13209	30.78160	62.91772	37.07942	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21100	-0.0000532970	0.22730	0.0000532970	41828	97.47390	99.95847	0.04145	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59020	0.0003439120	0.63580	0.0003439120	36057	84.02545	98.25217	1.74732	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47320	-0.0012406450	0.40280	0.0012406450	21029	49.00494	81.09215	18.90601	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25920	-0.0011456800	0.32250	0.0011456800	22330	52.03673	83.40037	16.59793	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54750	-0.0013206230	0.57560	0.0013206230	20001	46.60934	79.13272	20.86531	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56360	-0.0023085000	0.56920	0.0023085000	9957	23.20330	52.71526	47.28131	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	0.0022986240	0.40400	0.0022986240	10035	23.38507	52.98267	47.01391	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12130	0.0018508170	0.20290	0.0018508170	13864	32.30798	64.75487	35.24238	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24650	-0.0040793110	0.25290	0.0040793110	2459	5.73033	19.18983	80.80410	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54540	0.0020788520	0.50880	0.0020788520	11782	27.45619	58.67150	41.32541	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24350	-0.0029088950	0.26050	0.0029088950	6252	14.56935	38.44365	61.55202	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43600	-0.0034251000	0.48180	0.0034251000	4191	9.76650	28.78723	71.20768	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik