SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43770	-0.0009270640	0.44320	0.0009270640	20778	53.00916	83.41749	16.58062	rs29026456
BTA-07775-no-rs	1	38649369	785	0.06180	0.0018409940	0.08410	0.0018409940	9251	23.60130	51.86764	48.12861	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75700	0.0019918810	0.74420	0.0019918810	7968	20.32809	46.85572	53.14022	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80390	0.0017572670	0.82220	0.0017572670	10075	25.70350	54.89045	45.10596	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20330	0.0012160140	0.22940	0.0012160140	16455	41.98025	74.00475	25.99277	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53270	0.0008388740	0.49290	0.0008388740	22303	56.89976	86.16268	13.83561	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20430	-0.0021649860	0.24330	0.0021649860	6753	17.22836	41.70189	58.29369	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06320	-0.0001155910	0.06440	0.0001155910	36636	93.46634	99.69892	0.30085	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.53870	-0.0002043270	0.53820	0.0002043270	34703	88.53484	99.06753	0.93206	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02400	-0.0010370780	0.03300	0.0010370780	19032	48.55474	79.92392	20.07397	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68350	-0.0013392770	0.66280	0.0013392770	14693	37.48501	69.41446	30.58281	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82860	0.0033723520	0.84200	0.0033723520	1719	4.38554	14.45772	85.53540	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58810	-0.0018364610	0.58330	0.0018364610	9290	23.70079	52.01393	47.98232	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.23830	0.0001221430	0.20900	0.0001221430	36472	93.04794	99.65911	0.34064	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25940	-0.0027185990	0.23890	0.0027185990	3713	9.47266	26.69581	73.29864	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik