SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43680	0.0000878660	0.43950	0.0000878660	37142	94.93648	99.82686	0.17296	rs29026456
BTA-07775-no-rs	1	38649369	785	0.06030	-0.0011250260	0.08420	0.0011250260	17928	45.82471	77.90905	22.08869	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75320	0.0015124120	0.74480	0.0015124120	12844	32.82979	64.55073	35.44624	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80200	0.0025362920	0.82370	0.0025362920	4802	12.27411	32.99919	66.99572	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20470	-0.0001797830	0.23420	0.0001797830	35156	89.86018	99.29270	0.70694	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53370	0.0008099050	0.49450	0.0008099050	22910	58.55890	87.53034	12.46804	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20350	0.0000591310	0.24120	0.0000591310	37779	96.56468	99.92051	0.07938	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06380	0.0011066280	0.06370	0.0011066280	18206	46.53529	78.53066	21.46712	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.53610	-0.0012140870	0.53470	0.0012140870	16674	42.61943	74.97182	25.02574	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02580	0.0010291120	0.03290	0.0010291120	19361	49.48751	80.99964	18.99830	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68530	0.0035304970	0.65530	0.0035304970	1562	3.99254	13.82499	86.16793	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82760	-0.0038566700	0.84360	0.0038566700	1060	2.70940	10.11960	89.87266	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58720	0.0019304780	0.58490	0.0019304780	8767	22.40881	50.55666	49.43947	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.24040	0.0000644680	0.21070	0.0000644680	37653	96.24262	99.90491	0.09496	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25670	0.0002126140	0.23250	0.0002126140	34420	87.97894	99.00456	0.99502	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik