SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43770	0.0005222340	0.44320	0.0005222340	27793	70.90594	93.99695	6.00197	rs29026456
BTA-07775-no-rs	1	38649369	785	0.06180	-0.0007585680	0.08410	0.0007585680	23296	59.43312	88.08742	11.91102	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75700	0.0023660600	0.74420	0.0023660600	5339	13.62094	35.64548	64.34963	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80390	0.0020850700	0.82220	0.0020850700	7094	18.09832	43.69300	56.30270	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20330	-0.0002897980	0.22940	0.0002897980	32642	83.27678	98.04380	1.95560	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53270	0.0010754820	0.49290	0.0010754820	18107	46.19486	78.32279	21.67499	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20430	-0.0001480550	0.24330	0.0001480550	35851	91.46363	99.48728	0.51242	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06320	0.0007647330	0.06440	0.0007647330	23198	59.18310	87.93329	12.06513	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.53870	-0.0008108300	0.53820	0.0008108300	22369	57.06814	86.58427	13.41406	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02400	0.0007915470	0.03300	0.0007915470	22714	57.94831	87.15524	12.84313	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68350	0.0032109540	0.66280	0.0032109540	2040	5.20448	17.06823	82.92514	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82860	-0.0042757490	0.84200	0.0042757490	594	1.51542	6.23899	93.75218	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58810	0.0018060010	0.58330	0.0018060010	9321	23.77988	52.63003	47.36624	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.23830	0.0003796680	0.20900	0.0003796680	30711	78.35038	96.70950	3.28972	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25940	0.0005008040	0.23890	0.0005008040	28228	72.01572	94.45675	5.54222	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik