SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18300	-0.0009729200	0.23790	0.0009729200	25915	60.39103	88.78239	11.21624	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55580	-0.0031442500	0.59330	0.0031442500	5934	13.82830	36.85268	63.14290	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60910	-0.0051885410	0.62370	0.0051885410	1163	2.71020	10.62695	89.36575	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21100	0.0047530930	0.22730	0.0047530930	1662	3.87304	14.10808	85.88523	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59020	-0.0028057020	0.63580	0.0028057020	7665	17.86214	44.08451	55.91154	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47320	-0.0030185700	0.40280	0.0030185700	6551	15.26613	39.52655	60.46921	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25920	-0.0038086260	0.32250	0.0038086260	3514	8.18885	25.10538	74.88926	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54750	0.0019734020	0.57560	0.0019734020	13800	32.15884	64.37615	35.62107	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56360	0.0048451240	0.56920	0.0048451240	1541	3.59107	13.29051	86.70267	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	0.0028954320	0.40400	0.0028954320	7166	16.69929	42.08283	57.91309	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12130	-0.0001903850	0.20290	0.0001903850	39398	91.81115	99.53147	0.46827	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24650	0.0003565520	0.25290	0.0003565520	36308	84.61037	98.34945	1.65005	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54540	-0.0009005700	0.50880	0.0009005700	26980	62.87286	90.18593	9.81281	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24350	0.0057463630	0.26050	0.0057463630	721	1.68018	7.24111	92.75080	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43600	0.0030425780	0.48180	0.0030425780	6420	14.96085	38.96780	61.02792	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik