SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43750	-0.0003974720	0.43380	0.0003974720	27155	69.55330	93.06358	6.93523	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05770	-0.0000247030	0.08090	0.0000247030	38286	98.06362	99.97248	0.02744	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75150	0.0000663230	0.74670	0.0000663230	36941	94.61862	99.78889	0.21091	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.79860	-0.0013433570	0.82060	0.0013433570	8089	20.71871	47.10089	52.89508	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20360	-0.0023782760	0.23320	0.0023782760	1382	3.53978	12.10981	87.88306	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53490	-0.0023778050	0.49080	0.0023778050	1386	3.55002	12.13835	87.85451	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20130	-0.0004757240	0.23830	0.0004757240	24989	64.00543	90.22577	9.77281	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06450	0.0002264150	0.06440	0.0002264150	32087	82.18585	97.67647	2.32285	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.53150	-0.0009753580	0.52640	0.0009753580	13544	34.69085	65.88124	34.11583	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02640	0.0005468030	0.03490	0.0005468030	23071	59.09277	87.28619	12.71217	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68980	0.0006348120	0.66000	0.0006348120	20807	53.29389	83.28109	16.71701	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82680	-0.0004239600	0.84430	0.0004239600	26441	67.72450	92.18312	7.81561	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58750	-0.0014236970	0.58490	0.0014236970	7147	18.30593	43.19199	56.80373	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.24320	0.0013549450	0.21140	0.0013549450	7929	20.30890	46.45299	53.54294	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25860	0.0012726310	0.23050	0.0012726310	8986	23.01624	50.62155	49.37463	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik