SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18280	-0.0006943210	0.23640	0.0006943210	30313	70.63991	93.95581	6.04321	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55740	-0.0033055380	0.59520	0.0033055380	5215	12.15278	33.64061	66.35472	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60810	-0.0044471750	0.61180	0.0044471750	2093	4.87742	16.94144	83.05228	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21240	0.0045715520	0.22770	0.0045715520	1888	4.39970	15.63548	84.35806	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58920	-0.0026623080	0.63230	0.0026623080	8511	19.83361	47.40705	52.58919	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	-0.0032561810	0.40350	0.0032561810	5417	12.62351	34.57651	65.41889	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25890	-0.0037147550	0.32560	0.0037147550	3756	8.75280	26.43034	73.56442	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54720	0.0018115910	0.57680	0.0018115910	15249	35.53551	68.32969	31.66775	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56570	0.0049381920	0.56780	0.0049381920	1419	3.30677	12.49320	87.49983	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37030	0.0032623800	0.40800	0.0032623800	5397	12.57690	34.48448	65.51092	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12150	-0.0003507690	0.20270	0.0003507690	36349	84.70591	98.37353	1.62597	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24760	0.0004724900	0.25200	0.0004724900	34131	79.53719	97.08918	2.91015	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54530	-0.0008250450	0.50700	0.0008250450	28132	65.55742	91.61697	8.38187	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24440	0.0055094630	0.25970	0.0055094630	882	2.05537	8.55161	91.44061	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43530	0.0028588710	0.47910	0.0028588710	7344	17.11409	42.86547	57.13049	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik