SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18280	-0.0009499450	0.23640	0.0009499450	25241	58.82038	87.90748	12.09108	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55740	-0.0003728180	0.59520	0.0003728180	35473	82.66452	97.90772	2.09171	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60810	-0.0029038440	0.61180	0.0029038440	5964	13.89821	37.23138	62.76424	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21240	0.0011189920	0.22770	0.0011189920	22593	52.64961	83.78104	16.21727	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58920	0.0002378950	0.63230	0.0002378950	38153	88.90986	99.14322	0.85642	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	0.0046378400	0.40350	0.0046378400	1449	3.37668	12.91435	87.07865	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25890	0.0017655650	0.32560	0.0017655650	14482	33.74814	66.38499	33.61234	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54720	0.0008811480	0.57680	0.0008811480	26267	61.21132	89.32658	10.67209	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56570	-0.0003090900	0.56780	0.0003090900	36713	85.55416	98.54821	1.45132	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37030	0.0003571250	0.40800	0.0003571250	35809	83.44752	98.09291	1.90655	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12150	0.0028210290	0.20270	0.0028210290	6392	14.89560	39.08109	60.91465	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24760	-0.0014466980	0.25200	0.0014466980	18049	42.06050	75.01158	24.98623	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54530	-0.0001879760	0.50700	0.0001879760	39149	91.23089	99.46391	0.53581	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24440	-0.0003429600	0.25970	0.0003429600	36096	84.11633	98.24451	1.75497	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43530	0.0027494840	0.47910	0.0027494840	6783	15.80677	40.72577	59.27008	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik