SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18300	-0.0008788130	0.23790	0.0008788130	26345	61.39308	89.38937	10.60930	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55580	-0.0003577580	0.59330	0.0003577580	35788	83.39858	98.07365	1.92580	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60910	-0.0032039990	0.62370	0.0032039990	4703	10.95964	31.39412	68.60103	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21100	0.0011183250	0.22730	0.0011183250	22572	52.60067	83.71036	16.28795	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59020	0.0002231780	0.63580	0.0002231780	38474	89.65790	99.25728	0.74238	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47320	0.0044738350	0.40280	0.0044738350	1626	3.78915	14.07410	85.91914	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25920	0.0020415830	0.32250	0.0020415830	11770	27.42823	58.54740	41.44951	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54750	0.0011482230	0.57560	0.0011482230	22111	51.52638	82.92063	17.07763	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56360	-0.0003846760	0.56920	0.0003846760	35263	82.17515	97.77903	2.22039	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	0.0003909060	0.40400	0.0003909060	35150	81.91182	97.71282	2.28659	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12130	0.0028667730	0.20290	0.0028667730	6143	14.31534	37.97787	62.01780	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24650	-0.0016819680	0.25290	0.0016819680	15366	35.80817	68.64120	31.35626	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54540	-0.0004628610	0.50880	0.0004628610	33735	78.61437	96.80000	3.19930	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24350	-0.0004887670	0.26050	0.0004887670	33218	77.40958	96.42838	3.57088	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43600	0.0030684930	0.48180	0.0030684930	5223	12.17142	33.85898	66.13638	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik