SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43680	0.0019637850	0.43950	0.0019637850	5678	14.51320	37.05887	62.93639	rs29026456
BTA-07775-no-rs	1	38649369	785	0.06030	-0.0014280210	0.08420	0.0014280210	10652	27.22695	57.10709	42.88946	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75330	0.0012549760	0.74490	0.0012549760	12866	32.88603	64.27712	35.71985	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80200	0.0011535130	0.82370	0.0011535130	14356	36.69453	68.61237	31.38485	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20470	0.0000975540	0.23430	0.0000975540	36602	93.55622	99.70481	0.29495	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53370	0.0003391070	0.49440	0.0003391070	30563	78.12029	96.53751	3.46167	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20360	-0.0004829580	0.24120	0.0004829580	27197	69.51665	93.19893	6.79990	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06380	0.0012157770	0.06370	0.0012157770	13447	34.37109	66.01082	33.98624	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.53620	-0.0005279050	0.53470	0.0005279050	26177	66.90949	91.95415	8.04458	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02580	0.0001958560	0.03290	0.0001958560	34126	87.22746	98.83141	1.16812	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68530	0.0009711000	0.65530	0.0009711000	17255	44.10449	76.02483	23.97282	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82760	-0.0005306510	0.84360	0.0005306510	26102	66.71779	91.85830	8.14042	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58720	0.0012215410	0.58490	0.0012215410	13353	34.13082	65.73414	34.26291	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.24040	0.0038132830	0.21070	0.0038132830	412	1.05309	4.36574	95.62505	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25670	0.0028675340	0.23250	0.0028675340	1747	4.46540	14.83329	85.15978	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik