SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18280	-0.0030004400	0.23640	0.0030004400	4663	10.86642	31.45461	68.54050	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55740	-0.0013233600	0.59520	0.0013233600	18218	42.45433	75.60532	24.39253	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60810	-0.0036045130	0.61180	0.0036045130	2764	6.44109	21.31160	78.68252	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21240	0.0059095190	0.22770	0.0059095190	340	0.79232	3.97341	96.01696	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58920	-0.0003647840	0.63230	0.0003647840	35009	81.58324	97.65815	2.34125	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	0.0002276860	0.40350	0.0002276860	37948	88.43214	99.08118	0.91844	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25890	-0.0011077800	0.32560	0.0011077800	21365	49.78794	81.82597	18.17223	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54720	0.0005390430	0.57680	0.0005390430	31313	72.97026	94.94433	5.05479	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56570	0.0026164790	0.56780	0.0026164790	6468	15.07271	39.68113	60.31460	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37030	-0.0020347500	0.40800	0.0020347500	10495	24.45703	54.81774	45.17894	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12150	-0.0009951460	0.20270	0.0009951460	23106	53.84508	84.80632	15.19206	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24760	0.0040801850	0.25200	0.0040801850	1795	4.18298	15.26219	84.73116	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54530	0.0010815740	0.50700	0.0010815740	21757	50.70144	82.52526	17.47298	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24440	0.0046672660	0.25970	0.0046672660	1063	2.47716	10.07542	89.91698	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43530	0.0015725660	0.47910	0.0015725660	15123	35.24189	68.31868	31.67876	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik