SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18220	-0.0032708330	0.24010	0.0032708330	3748	8.79792	26.90119	73.09348	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.56030	-0.0013930400	0.59060	0.0013930400	17351	40.72909	73.90901	26.08873	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60310	-0.0032252410	0.61470	0.0032252410	3906	9.16880	27.73681	72.25794	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21480	0.0061074370	0.22680	0.0061074370	296	0.69482	3.55530	96.43476	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58840	-0.0004374890	0.63530	0.0004374890	33317	78.20708	96.72140	3.27789	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	0.0005290730	0.40660	0.0005290730	31496	73.93254	95.29232	4.70682	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25790	-0.0006839580	0.32370	0.0006839580	28486	66.86697	92.32923	7.66966	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54740	0.0007237340	0.57630	0.0007237340	27758	65.15809	91.49536	8.50346	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56830	0.0025550530	0.57070	0.0025550530	6891	16.17568	41.63379	58.36206	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	-0.0017579750	0.40550	0.0017579750	13119	30.79505	63.11899	36.87815	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12190	-0.0009055840	0.20260	0.0009055840	24575	57.68644	87.27830	12.72023	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24900	0.0039355630	0.25140	0.0039355630	2085	4.89425	17.21690	82.77669	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54510	0.0007289650	0.50840	0.0007289650	27665	64.93979	91.38538	8.61343	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24590	0.0045817900	0.25930	0.0045817900	1159	2.72059	10.83881	89.15374	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43580	0.0015747590	0.47940	0.0015747590	15084	35.40762	68.44089	31.55655	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik