SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18280	-0.0004895430	0.23640	0.0004895430	32131	74.87649	95.60335	4.39582	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55740	0.0018745190	0.59520	0.0018745190	11164	26.01603	56.46432	43.53249	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60810	-0.0037958420	0.61180	0.0037958420	1949	4.54185	15.85078	84.14276	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21240	0.0012530280	0.22770	0.0012530280	18635	43.42608	76.12063	23.87723	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58920	-0.0009409480	0.63230	0.0009409480	23546	54.87043	85.28180	14.71660	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	-0.0018113350	0.40350	0.0018113350	11805	27.50979	58.47516	41.52175	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25890	0.0004734970	0.32560	0.0004734970	32456	75.63386	95.86984	4.12935	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54720	0.0013744110	0.57680	0.0013744110	16933	39.45982	72.31358	27.68408	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56570	-0.0001748070	0.56780	0.0001748070	38863	90.56441	99.39901	0.60069	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37030	-0.0005604390	0.40800	0.0005604390	30633	71.38563	94.26641	5.73264	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12150	0.0029182170	0.20270	0.0029182170	4453	10.37705	29.93362	70.06141	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24760	0.0004533360	0.25200	0.0004533360	32846	76.54269	96.17750	3.82172	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54530	-0.0012148440	0.50700	0.0012148440	19234	44.82196	77.37998	22.61795	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24440	-0.0001883920	0.25970	0.0001883920	38581	89.90725	99.31178	0.68790	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43530	0.0043160830	0.47910	0.0043160830	1160	2.70321	10.43201	89.56064	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik