SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18220	-0.0004924410	0.24010	0.0004924410	31788	74.61797	95.50084	4.49832	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.56030	0.0020499510	0.59060	0.0020499510	9645	22.64031	51.61474	48.38174	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60310	-0.0039797430	0.61470	0.0039797430	1604	3.76517	13.56265	86.43053	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21480	0.0011352940	0.22680	0.0011352940	20231	47.48950	79.70755	20.29051	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58840	-0.0010712690	0.63530	0.0010712690	21209	49.78522	81.55603	18.44213	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	-0.0019262780	0.40660	0.0019262780	10718	25.15903	55.27109	44.72561	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25790	0.0005282260	0.32370	0.0005282260	31021	72.81754	94.82967	5.16943	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54740	0.0017427270	0.57630	0.0017427270	12550	29.45940	61.01641	38.98060	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56830	-0.0001578120	0.57070	0.0001578120	39036	91.63165	99.52197	0.47776	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	-0.0006476070	0.40550	0.0006476070	28651	67.25429	92.44647	7.55242	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12190	0.0025402660	0.20260	0.0025402660	6203	14.56069	38.18237	61.81328	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24900	0.0005042700	0.25140	0.0005042700	31549	74.05695	95.29671	4.70242	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54510	-0.0016064830	0.50840	0.0016064830	14026	32.92411	65.25089	34.74636	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24590	-0.0001951140	0.25930	0.0001951140	38202	89.67395	99.27182	0.72784	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43580	0.0039907580	0.47940	0.0039907580	1592	3.73700	13.48074	86.51243	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik