SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43770	0.0004949060	0.44270	0.0004949060	28475	72.64587	94.54981	5.44915	rs29026456
BTA-07775-no-rs	1	38649369	785	0.06180	-0.0011747920	0.08410	0.0011747920	16375	41.77616	73.73652	26.26100	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75710	0.0008556670	0.74410	0.0008556670	21603	55.11391	84.84760	15.15060	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80380	0.0009310550	0.82190	0.0009310550	20290	51.76417	82.37624	17.62180	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20340	0.0005042340	0.22970	0.0005042340	28276	72.13817	94.34046	5.65848	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53270	-0.0018096710	0.49300	0.0018096710	8848	22.57316	50.50865	49.48753	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20430	-0.0011476090	0.24310	0.0011476090	16766	42.77368	74.69240	25.30518	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06320	0.0005843760	0.06440	0.0005843760	26658	68.01031	92.48747	7.51130	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.53870	-0.0015031340	0.53820	0.0015031340	12002	30.61969	61.47447	38.52236	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02410	0.0000314070	0.03310	0.0000314070	38465	98.13251	99.97602	0.02392	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68360	-0.0004853420	0.66300	0.0004853420	28676	73.15866	94.75740	5.24158	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82860	0.0005945630	0.84190	0.0005945630	26472	67.53578	92.25648	7.74226	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58820	-0.0003996400	0.58340	0.0003996400	30413	77.59012	96.37730	3.62186	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.23850	0.0024255550	0.20920	0.0024255550	4560	11.63354	31.64560	68.34929	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25940	0.0006699760	0.23860	0.0006699760	24981	63.73192	90.27430	9.72429	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik