SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43760	0.0006156440	0.43340	0.0006156440	25940	66.44127	91.63596	8.36274	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05800	-0.0015111870	0.08210	0.0015111870	11871	30.40572	61.09067	38.90613	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75130	0.0016324950	0.74480	0.0016324950	10502	26.89924	56.54041	43.45614	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.79890	0.0009471600	0.82140	0.0009471600	19923	51.02966	81.70789	18.29010	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20370	0.0004241070	0.23320	0.0004241070	29860	76.48174	95.94105	4.05805	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53510	-0.0017799800	0.49320	0.0017799800	9094	23.29286	51.45903	48.53720	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20150	-0.0014539620	0.23900	0.0014539620	12527	32.08596	63.15030	36.84663	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06440	0.0003827510	0.06400	0.0003827510	30724	78.69474	96.67870	3.32049	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.53140	-0.0015130180	0.52590	0.0015130180	11844	30.33656	61.00429	38.99251	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02640	0.0004350860	0.03460	0.0004350860	29627	75.88494	95.72921	4.26987	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68970	-0.0000858770	0.66050	0.0000858770	37130	95.10271	99.82647	0.17335	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82690	0.0004292660	0.84390	0.0004292660	29751	76.20255	95.84260	4.15650	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58710	-0.0002398450	0.58260	0.0002398450	33730	86.39414	98.64859	1.35091	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.24290	0.0020375830	0.20950	0.0020375830	6870	17.59643	42.50718	57.48850	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25850	0.0005996760	0.23050	0.0005996760	26260	67.26090	92.04763	7.95110	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik