SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18220	-0.0003858230	0.24010	0.0003858230	34062	79.95587	97.30667	2.69269	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.56030	0.0000129460	0.59060	0.0000129460	42302	99.29814	99.99676	0.00322	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60310	-0.0019253600	0.61470	0.0019253600	11107	26.07216	57.42410	42.57271	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21480	0.0022629550	0.22680	0.0022629550	8436	19.80235	48.18201	51.81425	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58840	0.0014927440	0.63530	0.0014927440	15639	36.71041	70.16150	29.83603	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	-0.0034975710	0.40660	0.0034975710	2848	6.68529	22.54751	77.44670	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25790	-0.0003937330	0.32370	0.0003937330	33906	79.58968	97.20606	2.79329	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54740	-0.0004001260	0.57630	0.0004001260	33772	79.27513	97.11799	2.88135	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56830	-0.0011571380	0.57070	0.0011571380	20170	47.34631	80.06704	19.93104	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	-0.0012564270	0.40550	0.0012564270	18724	43.95202	77.18131	22.81661	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12190	-0.0006505210	0.20260	0.0006505210	28812	67.63222	92.82580	7.17313	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24900	0.0006677070	0.25140	0.0006677070	28443	66.76604	92.42338	7.57552	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54510	0.0012958020	0.50840	0.0012958020	18205	42.73374	76.08541	23.91244	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24590	0.0004861640	0.25930	0.0004861640	32019	75.16021	95.83325	4.16595	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43580	0.0003707670	0.47940	0.0003707670	34405	80.76101	97.52132	2.47807	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik