SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18280	-0.0001859290	0.23640	0.0001859290	38642	90.04940	99.34328	0.65641	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55740	0.0002370930	0.59520	0.0002370930	37523	87.44174	98.94837	1.05123	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60810	-0.0019326860	0.61180	0.0019326860	10911	25.42645	56.53477	43.46201	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21240	0.0023580530	0.22770	0.0023580530	7604	17.71999	44.79529	55.20078	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58920	0.0016077260	0.63230	0.0016077260	14218	33.13292	66.22614	33.77118	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	-0.0033971580	0.40350	0.0033971580	3010	7.01435	23.34029	76.65405	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25890	-0.0000798730	0.32560	0.0000798730	41039	95.63525	99.87446	0.12541	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54720	-0.0001034150	0.57680	0.0001034150	40511	94.40483	99.79367	0.20615	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56570	-0.0005665680	0.56780	0.0005665680	30508	71.09433	94.28714	5.71191	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37030	-0.0012065490	0.40800	0.0012065490	19357	45.10859	78.16500	21.83299	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12150	-0.0006829190	0.20270	0.0006829190	28201	65.71821	91.88832	8.11054	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24760	0.0005034640	0.25200	0.0005034640	31794	74.09116	95.43280	4.56636	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54530	0.0016296100	0.50700	0.0016296100	13944	32.49441	65.48734	34.50995	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24440	0.0005842280	0.25970	0.0005842280	30141	70.23909	93.93524	6.06379	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43530	0.0000535570	0.47910	0.0000535570	41645	97.04745	99.94185	0.05807	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik