SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18220	-0.0010686100	0.24010	0.0010686100	22611	53.07622	84.22314	15.77519	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.56030	-0.0009110740	0.59060	0.0009110740	25151	59.03852	88.15513	11.84345	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60310	0.0015888410	0.61470	0.0015888410	15808	37.10711	70.24809	29.74942	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21480	0.0023823590	0.22680	0.0023823590	8764	20.57229	48.75868	51.23760	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58840	-0.0003267680	0.63530	0.0003267680	35808	84.05436	98.27308	1.72641	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	0.0011626480	0.40660	0.0011626480	21213	49.79461	81.78557	18.21261	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25790	-0.0019600880	0.32370	0.0019600880	12044	28.27164	59.83871	40.15822	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54740	0.0001395640	0.57630	0.0001395640	39675	93.13162	99.68124	0.31854	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56830	-0.0008593680	0.57070	0.0008593680	25977	60.97744	89.29908	10.69958	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	-0.0034125610	0.40550	0.0034125610	3717	8.72515	26.37962	73.61504	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12190	0.0007013970	0.20260	0.0007013970	28656	67.26603	92.56288	7.43602	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24900	-0.0001826650	0.25140	0.0001826650	38751	90.96265	99.44852	0.55120	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54510	-0.0004670550	0.50840	0.0004670550	33033	77.54043	96.55399	3.44528	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24590	0.0003174010	0.25930	0.0003174010	36013	84.53557	98.37629	1.62321	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43580	0.0000315400	0.47940	0.0000315400	41928	98.42022	99.98321	0.01675	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik