SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.44020	0.0015332210	0.44070	0.0015332210	12754	32.66738	64.40103	35.59597	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05500	0.0002286040	0.07740	0.0002286040	34236	87.69018	98.90999	1.08956	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.73920	0.0023536860	0.72050	0.0023536860	5889	15.08376	38.79507	61.20031	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80380	0.0015646010	0.82700	0.0015646010	12413	31.79397	63.36472	36.63221	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20450	0.0015479010	0.23040	0.0015479010	12586	32.23708	63.89304	36.10392	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.54260	0.0043665940	0.51370	0.0043665940	654	1.67512	7.57987	92.41156	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20150	-0.0013075420	0.25170	0.0013075420	15517	39.74438	72.09186	27.90557	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06310	0.0013639220	0.06510	0.0013639220	14819	37.95656	70.26286	29.73446	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.52240	0.0031469600	0.51710	0.0031469600	2557	6.54936	21.14100	78.85283	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02860	0.0013875610	0.03790	0.0013875610	14487	37.10619	69.36650	30.63078	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.69020	0.0008473420	0.66230	0.0008473420	22517	57.67379	86.75979	13.23855	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82380	0.0009262760	0.83680	0.0009262760	21141	54.14938	84.36817	15.63002	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58370	0.0021693190	0.56890	0.0021693190	7066	18.09846	44.01192	55.98383	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.23440	0.0029174250	0.20740	0.0029174250	3267	8.36791	25.36153	74.63275	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25230	0.0013413210	0.23600	0.0013413210	15101	38.67886	71.01129	28.98608	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik